dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01033
Location and strand information: 39120 - 39989 (-)
Family: 3.A.1.1.45
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01034
Location and strand information: 40003 - 40953 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01035
Location and strand information: 41074 - 42459 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01036
Location and strand information: 42535 - 43542 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor PurR

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01037
Location and strand information: 43906 - 46344 (+)
Family: GH94
Protein type: CAZyme
Protein description: Cellobiose phosphorylase
Protein isoelectric point: 4.8097
Protein molecular weight: 90404.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01038
Location and strand information: 46346 - 47716 (+)
Family: GH1
Protein type: CAZyme
Protein description: Beta-glucosidase A
Protein isoelectric point: 5.1806
Protein molecular weight: 51101.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01039
Location and strand information: 47771 - 49528 (-)
Family: null
Protein type: null
Protein description: Arginine--tRNA ligase

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01040
Location and strand information: 49668 - 50828 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01041
Location and strand information: 50897 - 51889 (-)
Family: 3.A.1.2.11
Protein type: TC
Protein description: Ribose import permease protein RbsC

Gene clsuter ID: MGYG000002993_14|CGC1
Gene ID: MGYG000002993_01042
Location and strand information: 51895 - 53394 (-)
Family: 3.A.1.2.1
Protein type: TC
Protein description: Galactose/methyl galactoside import ATP-binding protein MglA

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is cellobiose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002993_01033	L-arabinose transport system permease protein AraQ	TC	39120	39989	-	3.A.1.1.45
MGYG000002993_01034	Lactose transport system permease protein LacF	TC	40003	40953	-	3.A.1.1.11
MGYG000002993_01035	hypothetical protein	null	41074	42459	-	No domain
MGYG000002993_01036	HTH-type transcriptional repressor PurR	TF	42535	43542	-	LacI
MGYG000002993_01037	Cellobiose phosphorylase	CAZyme	43906	46344	+	GH94
MGYG000002993_01038	Beta-glucosidase A	CAZyme	46346	47716	+	GH1
MGYG000002993_01039	Arginine--tRNA ligase	null	47771	49528	-	Arg_tRNA_synt_N\| tRNA-synt_1d\| DALR_1
MGYG000002993_01040	hypothetical protein	null	49668	50828	-	Peripla_BP_4
MGYG000002993_01041	Ribose import permease protein RbsC	TC	50897	51889	-	3.A.1.2.11
MGYG000002993_01042	Galactose/methyl galactoside import ATP-binding protein MglA	TC	51895	53394	-	3.A.1.2.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature